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Genome-Wide Determination, Characterization and Bioinformatic Analysis of Cold Shock Protein (CSP) Genes In Atlantic Salmon (Salmo salar), Carp (Cyprinus carpio) and Rainbow Trout (Oncorhynchus mykiss)

Atlantic salmon (Salmo salar) is the symbol of the underwater world; carp (Cyprinus carpio) is a freshwater fish that gives its name to the Cyprinidae family and rainbow trout (Oncorhynchus mykiss) is a species of Salmonidae family, like as salmon. These three types of fish are important in the world because they are made of fish farming. The cold shock proteins (CSP) were first described in Escherichia coli and are the conserved proteins that have the activity to protect the organism against cold temperatures. They can be characterized by general stress response in fish. There is no comprehensive study related to the identification of CSPs in fish genomes. In this study, determination, characterization and bioinformatics analysis of CSPs were carried out in the genomes of salmon, carp and rainbow trout. The study results represent preliminary knowledge about understanding of the effects of these proteins in cold tolerance in economically important fish species.



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Keywords: Atlantic Salmon, Carp, Rainbow Trout, Cold Shock Protein

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EISSN: 2667-8209


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